Turning Oscillations Into Opportunities: Lessons from a Bacterial Decision Gate

نویسندگان

  • Daniel Schultz
  • Mingyang Lu
  • Trevor Stavropoulos
  • Jose' Onuchic
  • Eshel Ben-Jacob
چکیده

Sporulation vs. competence provides a prototypic example of collective cell fate determination. The decision is performed by the action of three modules: 1) A stochastic competence switch whose transition probability is regulated by population density, population stress and cell stress. 2) A sporulation timer whose clock rate is regulated by cell stress and population stress. 3) A decision gate that is coupled to the timer via a special repressilator-like loop. We show that the distinct circuit architecture of this gate leads to special dynamics and noise management characteristics: The gate opens a time-window of opportunity for competence transitions during which it generates oscillations that are turned into a chain of transition opportunities - each oscillation opens a short interval with high transition probability. The special architecture of the gate also leads to filtering of external noise and robustness against internal noise and variations in the circuit parameters.

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عنوان ژورنال:

دوره 3  شماره 

صفحات  -

تاریخ انتشار 2013